PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_002730-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family bHLH
Protein Properties Length: 445aa    MW: 48559.4 Da    PI: 5.8321
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_002730-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.18.5e-10280328355
                    HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  NNU_002730-RA 280 NSHSLAERVRREKISERMRYLQDLVPGC----NKITGKAVMLDEIINYVQSLQ 328
                    58**************************....999*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.79E-10275332No hitNo description
SuperFamilySSF474594.97E-17275345IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.402277327IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.6E-17278345IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.1E-7280328IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.0E-9283333IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009637Biological Processresponse to blue light
GO:0005634Cellular Componentnucleus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 445 aa     Download sequence    Send to blast
MGAGDNGNLG FQQRGGSLLN YPSSGMMYMP EKVVGMTMST MPMCKPSNLV DSSFGSAWDP  60
FVSQAQNVEF QASSMASRQI VTSHYGVGSL ENQEISTDPR LVQFPSDANL VNLVPKLPCF  120
GSGSFSDVVS SFGLPPCGQI VNSECPSDCP SSNKENGTEI TSTSPRDGVH ATVFQEDHHH  180
ILDEGTGGPS PNGKKRKRVP ESHSQLDPRQ SEIEPQREVS QEILVGPKEQ DDKKQKKEQN  240
AGTNSRCKLT GKQAKDQSQN GEGPKEDYIH VRARRGQATN SHSLAERVRR EKISERMRYL  300
QDLVPGCNKI TGKAVMLDEI INYVQSLQRQ VEFLSMKLAT VNPEINIDIE QILSKDVSKT  360
EILHSRGGSS GILGFAPAMS SSLPQQHITQ PDGAFLIQGS NPQLTTMSQA PSAWEDELQN  420
VMQLGFVPNP TVDNLGQNGC MKVEL
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00135DAPTransfer from AT1G10120Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010248337.10.0PREDICTED: transcription factor bHLH74-like isoform X4
SwissprotQ6NKN91e-74BH074_ARATH; Transcription factor bHLH74
TrEMBLA0A061FEC81e-147A0A061FEC8_THECC; Basic helix-loop-helix DNA-binding superfamily protein, putative isoform 1
STRINGVIT_18s0001g08600.t011e-142(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.11e-71bHLH family protein